Now showing items 1-2 of 2

  • BWT-runs Compressed Data Structures for Pan-Genomics Text Indexing 

    Brown, Nathaniel (2023-04-14)
    The FM-index is used in many bioinformatics applications; however, it cannot handle large text collections. This is of particular concern due to reference bias; references fail to capture the required genetic diversity. A ...
  • A Cache-Friendly BWT Layout 

    Li, Yansong (2023-08-21)
    The Burrows-Wheeler Transform (BWT) is a widely used succinct data structure in bioinformatics. However, one of the main concerns that researchers still face when using BWT is its processing time due to the lack of access ...