Browsing Computer Science Faculty Research and Publications by Submit Date
Now showing items 1-20 of 40
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Detecting recombination in evolving nucleotide sequences
BACKGROUND:Genetic recombination can produce heterogeneous phylogenetic histories within a set of homologous genes. These recombination events can be obscured by subsequent residue substitutions, which consequently complicate ... -
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Classifying short genomic fragments from novel lineages using composition and homology
No abstract available. -
Rapid identification of high-confidence taxonomic assignments for metagenomic data
No abstract available. -
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
BACKGROUND:The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA structure and flexibility may also play a role ... -
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Phylogenetic identification of lateral genetic transfer events
BACKGROUND:Lateral genetic transfer can lead to disagreements among phylogenetic trees comprising sequences from the same set of taxa. Where topological discordance is thought to have arisen through genetic transfer events, ... -
Stability Visualizations as a Low-complexity Descriptor of Network Host Behaviour
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Discover gene specific local co-regulations from time-course gene expression data
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Approximate Subgraph Matching-Based Literature Mining for Biomedical Events and Relations
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Spatial Interactions in the Superior Colliculus Predict Saccade Behavior in a Neural Field Model
No abstract available.